Miyakogusa Predicted Gene

Lj4g3v2295530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IIU2_MEDTR 517 77.1 87.7 (tr|G7IIU2) p21-activated protein kinase-interacting protein 1-like protein OS=Medicago truncatula GN=MTR_2g049300 PE=4 SV=1
TAIR_pep AT1G65030.1 402 58.7 74.4 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:24156798-24158511 FORWARD LENGTH=345
Medicago Medtr2g049300.1 517 77.1 87.7 | p21-activated kinase-interacting-like protein | HC | chr2:21720716-21724907 | 20130731
Soybean Glyma15g23160.1 461 66.4 77.0  
LJGI gnl|LJGI|TC78508 1933 99.7 99.7 similar to UniRef100_A7PNN5 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2295530.1 length: 442 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 4.3e-06 94-129
136-176
183-212
310-350
HMMSmart SM00320 WD40 1.9e-05 92-129
132-176
179-218
261-298
301-350
ProfileScan PS50082 WD_REPEATS_2 9.940 336-352
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 4.9e-42 70-375
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 18.273 99-359
superfamily SSF50978 WD40 2.3e-42 76-375
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 337-351
no_ID  
HMMPanther PTHR22847 WD40 1.2e-27 72-353
Wolf-PSORT
Lj4g3v2295530.1	chlo 6, cyto 2, plas 2, cysk 2, cysk_plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2295530.1