Miyakogusa Predicted Gene

Lj4g3v2290280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MRL3_SOYBN 369 48.2 54.2 (tr|I1MRL3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G16760.1 208 79.8 93.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:5703213-5705080 FORWARD LENGTH=475
Medicago Medtr4g120360.1 370 48.8 53.0 | TPR repeat protein | HC | chr4:49898147-49901301 | 20130731
Soybean Glyma17g03210.1 369 48.2 54.2  
LJGI gnl|LJGI|TC66227 926 100.0 100.0 similar to UniRef100_A7Q8G7 Cluster: Chromosome chr5 scaffold_64, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_64, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2290280.1 length: 477 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.0043 431-462
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.2e-21 357-469
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 13.943 395-462
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.017 355-388
395-428
429-462
ProfileScan PS50005 TPR 8.408 395-428
429-462
no_ID  
HMMPanther PTHR22904 TPR 9.4e-93 337-477
HMMPanther PTHR22904:SF54 HYPOTHETICAL 9.4e-93 337-477
HMMPfam PF13414 TPR_11 9.1e-08 357-425
Seg seg seg NA 48-68
78-89
125-138
173-206
220-237
251-267
299-318
330-362
superfamily SSF48452 TPR-like 2.1e-20 357-477
Wolf-PSORT
Lj4g3v2290280.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2290280.1