Miyakogusa Predicted Gene

Lj4g3v2289110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KMV5_SOYBN 753 86.0 92.4 (tr|I1KMV5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06770.2 556 66.8 84.0 | Symbols: | Pectin lyase-like superfamily protein | chr3:2135119-2137033 REVERSE LENGTH=446
Medicago Medtr4g120730.1 736 83.6 91.4 | polygalacturonase/glycoside hydrolase family protein | HC | chr4:49981535-49985560 | 20130731
Soybean Glyma07g37320.1 753 86.0 92.4  
LJGI gnl|LJGI|FS345102 991 100.0 100.0 similar to UniRef100_A7Q8H9 Cluster: Chromosome chr5 scaffold_64, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_64, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2289110.1 length: 457 aa.
IPR000743 Glycoside hydrolase, family 28
method AccNumber shortName E-value location
Molecular Function GO:0004650 polygalacturonase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00295 Glyco_hydro_28 8.8e-31 137-417
IPR006626 Parallel beta-helix repeat
HMMSmart SM00710 Parallel 3.8e+03 184-206
234-255
268-290
296-317
325-346
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 1.5e-90 20-429
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 9.9e-97 35-418
no_ID  
HMMPanther PTHR31339 FAMILY 7.6e-177 36-437
HMMPanther PTHR31339:SF0 SUBFAMILY 7.6e-177 36-437
Seg seg seg NA 2-11
433-449
Wolf-PSORT
Lj4g3v2289110.1	cyto 4, E.R. 4, cyto_E.R. 4, nucl 2, cysk 2, cysk_nucl 2, E.R._vacu 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2289110.1