Miyakogusa Predicted Gene
- Lj4g3v2267600.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I3TA67_LOTJA |
624 |
99.7 |
100.0 |
(tr|I3TA67) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
TAIR_pep |
AT3G17000.1 |
385 |
64.3 |
74.0 |
| Symbols: UBC32 | ubiquitin-conjugating enzyme 32 | chr3:5797296-5799467 FORWARD LENGTH=309 |
Medicago |
Medtr4g121960.1 |
517 |
86.6 |
90.8 |
| ubiquitin-conjugating enzyme | HC | chr4:50350285-50353308 | 20130731 |
Soybean |
Glyma07g36950.1 |
503 |
83.3 |
90.8 |
|
LJGI |
gnl|LJGI|TC65558 |
1820 |
100.0 |
100.0 |
homologue to UniRef100_A7Q8P3 Cluster: Chromosome chr5 scaffold_64, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_64, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2267600.2 |
length: 305 aa. |
IPR000608 |
Ubiquitin-conjugating enzyme, E2 |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0016881 |
acid-amino acid ligase activity |
|
|
HMMPfam |
PF00179 |
UQ_con |
4.9e-24 |
8-119 |
ProfileScan |
PS50127 |
UBIQUITIN_CONJUGAT_2 |
24.232 |
7-119 |
IPR016135 |
Ubiquitin-conjugating enzyme/RWD-like |
Gene3D |
G3DSA:3.10.110.10 |
no description |
1.3e-38 |
1-165 |
superfamily |
SSF54495 |
UBC-like |
3.5e-38 |
4-159 |
no_ID |
|
HMMPanther |
PTHR24067 |
UBIQUITIN-CONJUGATING |
3.3e-75 |
1-288 |
HMMPanther |
PTHR24067:SF54 |
UBIQUITIN-CONJUGATING |
3.3e-75 |
1-288 |
HMMSmart |
SM00212 |
Ubiquitin-conjugating |
2.2e-28 |
7-167 |
- Wolf-PSORT
Lj4g3v2267600.2 cyto_nucl 4, nucl 3.5, cyto 3.5, golg 3, chlo 1, plas 1, vacu 1, pero 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj4g3v2267600.2 |
|