Miyakogusa Predicted Gene

Lj4g3v2263980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KMP8_SOYBN 1589 84.6 89.8 (tr|I1KMP8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G44900.1 1324 72.5 82.2 | Symbols: MCM2, ATMCM2 | minichromosome maintenance (MCM2/3/5) family protein | chr1:16970291-16974457 FORWARD LENGTH=936
Medicago Medtr4g122270.1 1535 82.4 87.9 | DNA replication licensing factor MCM2, putative | HC | chr4:50492382-50486664 | 20130731
Soybean Glyma07g36680.1 1589 84.6 89.8  
LJGI gnl|LJGI|FS361757 1415 99.7 99.7 homologue to UniRef100_Q8H0G9 Cluster: MCM protein-like protein; n=1; Nicotiana tabacum|Rep: MCM protein-like protein - Nicotiana tabacum (Common tobacco), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2263980.1 length: 931 aa.
IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
FPrintScan PR01657 MCMFAMILY 2.1e-32 534-549
594-608
622-635
646-658
673-681
HMMPfam PF00493 MCM 1.3e-141 480-823
HMMSmart SM00350 minichromosome 1.9e-287 310-824
ProfileScan PS50051 MCM_2 92.346 493-699
IPR008045 DNA replication licensing factor Mcm2
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003678 DNA helicase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006270 DNA replication initiation    
Cellular Component GO:0042555 MCM complex    
FPrintScan PR01658 MCMPROTEIN2 1.3e-28 323-340
346-358
381-395
442-453
457-468
HMMPfam PF12619 MCM2_N 1.6e-19 34-155
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.6e-23 391-466
superfamily SSF50249 Nucleic 2.2e-65 214-462
IPR018525 Mini-chromosome maintenance, conserved site
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
PatternScan PS00847 MCM_1 NA 602-610
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.6e-39 497-847
no_ID  
Gene3D G3DSA:3.30.1640.10 no description 1.9e-10 212-309
Gene3D G3DSA:3.40.50.300 no description 1.2e-39 503-682
HMMPanther PTHR11630 DNA 0 49-930
HMMPanther PTHR11630:SF44 DNA 0 49-930
Seg seg seg NA 3-14
40-59
84-94
176-189
903-911
Wolf-PSORT
Lj4g3v2263980.1	nucl 8, cysk 1.5, cysk_plas 1.5, chlo 1, vacu 1, pero 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2263980.1