Miyakogusa Predicted Gene

Lj4g3v2263920.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MRT0_SOYBN 682 72.4 76.7 (tr|I1MRT0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G16280.2 390 51.3 62.4 | Symbols: FCA | RNA binding;abscisic acid binding | chr4:9207164-9214412 REVERSE LENGTH=747
Medicago Medtr4g122650.1 630 69.7 74.9 | flowering time control FCA-like protein | HC | chr4:50587410-50576809 | 20130731
Soybean Glyma07g36630.1 756 60.0 64.1  
LJGI gnl|LJGI|TC70561 652 100.0 100.0 similar to UniRef100_Q531A8 Cluster: FCA gamma; n=1; Pisum sativum|Rep: FCA gamma - Pisum sativum (Garden pea), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2263920.2 length: 762 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3.7e-16 116-178
207-272
HMMSmart SM00360 RNA 2.4e-19 115-191
206-281
ProfileScan PS50102 RRM 16.500 114-195
205-285
IPR001202 WW domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF00397 WW 2.3e-08 616-642
HMMSmart SM00456 Domain 5.6e-10 612-644
PatternScan PS01159 WW_DOMAIN_1 NA 617-642
ProfileScan PS50020 WW_DOMAIN_2 12.039 617-644
superfamily SSF51045 WW 7.2e-10 615-652
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 5.2e-22 97-198
205-294
no_ID  
Gene3D G3DSA:2.20.70.10 no description 4.6e-14 615-645
HMMPanther PTHR24011 FAMILY 1.8e-103 106-751
HMMPanther PTHR24011:SF136SUBFAMILY NOT 1.8e-103 106-751
Seg seg seg NA 37-44
462-470
496-526
530-558
586-607
650-663
670-683
superfamily SSF54928 RNA-binding 6.3e-22 191-294
41-201
Wolf-PSORT
Lj4g3v2263920.2	nucl 10, chlo 2, plas 1, cysk 1, chlo_mito 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2263920.2