Miyakogusa Predicted Gene

Lj4g3v2249140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MRX2_SOYBN 763 77.8 83.7 (tr|I1MRX2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06430.1 681 70.5 83.3 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:1956658-1958240 REVERSE LENGTH=486
Medicago Medtr4g123860.1 762 77.4 84.4 | PPR containing plant-like protein | HC | chr4:51055768-51053720 | 20130731
Soybean Glyma17g04390.1 763 77.8 83.7  
LJGI gnl|LJGI|TC77126 1649 99.8 99.8 similar to UniRef100_A7NVY2 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2249140.1 length: 494 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.001 242-267
HMMPfam PF13041 PPR_2 7.4e-13 169-213
272-319
344-390
413-461
HMMPfam PF13812 PPR_3 6.8e-05 133-165
HMMTigr TIGR00756 PPR: 4.9e-07 134-166
169-196
239-274
276-307
311-339
346-378
417-448
ProfileScan PS51375 PPR 6.982 131-165
166-200
237-272
202-236
273-307
308-342
343-377
413-447
378-412
448-485
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00018 445-466
no_ID  
HMMPanther PTHR24015 FAMILY 9.3e-93 103-467
HMMPanther PTHR24015:SF0 SUBFAMILY 9.3e-93 103-467
Seg seg seg NA 3-18
80-94
Wolf-PSORT
Lj4g3v2249140.1	chlo 12.5, chlo_mito 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2249140.1