Miyakogusa Predicted Gene

Lj4g3v2249070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SMK2_LOTJA 540 100.0 100.0 (tr|I3SMK2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G17440.1 451 86.0 93.6 | Symbols: NPSN13, ATNPSN13 | novel plant snare 13 | chr3:5969909-5972290 REVERSE LENGTH=269
Medicago Medtr4g123910.1 480 92.8 96.2 | novel plant SNARE-like protein | HC | chr4:51088786-51082714 | 20130731
Soybean Glyma13g18030.1 484 92.4 96.6  
LJGI gnl|LJGI|TC61298 1564 100.0 100.0 similar to UniRef100_A7NVY7 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2249070.1 length: 263 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00397 Helical 5.4e-06 140-207
ProfileScan PS50192 T_SNARE 10.430 145-207
IPR005606 Sec20
HMMPfam PF03908 Sec20 1.4e-07 153-232
no_ID  
Coil coil coiled-coil NA 45-73
Gene3D G3DSA:1.20.5.110 no description 6.8e-16 135-208
HMMPanther PTHR21230 VESICLE 3.5e-126 9-242
HMMPanther PTHR21230:SF2 NOVEL 3.5e-126 9-242
Wolf-PSORT
Lj4g3v2249070.1	nucl 8, golg 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2249070.1