Miyakogusa Predicted Gene

Lj4g3v2215540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LYC1_SOYBN 3026 90.5 94.0 (tr|I1LYC1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G43300.1 2435 73.0 82.4 | Symbols: ATMIN7, BEN1 | HOPM interactor 7 | chr3:15234235-15245034 REVERSE LENGTH=1758
Medicago Medtr4g124430.2 2993 89.9 93.8 | guanine nucleotide-exchange protein, putative | HC | chr4:51466532-51487327 | 20130731
Soybean Glyma13g17610.1 2953 88.3 92.0  
LJGI gnl|LJGI|TC79896 1830 99.8 99.8 similar to UniRef100_A7PDN2 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2215540.1 length: 1612 aa.
IPR000904 SEC7-like
method AccNumber shortName E-value location
Molecular Function GO:0005086 ARF guanyl-nucleotide exchange factor activity    
Biological Process GO:0032012 regulation of ARF protein signal transduction    
HMMPfam PF01369 Sec7 2.3e-63 420-604
HMMSmart SM00222 Sec7 1.6e-83 419-604
ProfileScan PS50190 SEC7 42.610 415-602
superfamily SSF48425 Sec7 9.5e-74 418-609
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 5.1e-06 1547-1588
IPR015403 Domain of unknown function DUF1981, SEC7 associated
HMMPfam PF09324 DUF1981 3.5e-24 915-1000
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 6.8e-21 756-1605
IPR023394 SEC7-like, alpha orthogonal bundle
Gene3D G3DSA:1.10.1000.11 no description 3.1e-44 496-610
no_ID  
Coil coil coiled-coil NA 416-437
Gene3D G3DSA:1.10.220.20 no description 8.3e-31 410-495
HMMPanther PTHR10663 GUANYL-NUCLEOTIDE 0 1-1243
HMMPanther PTHR10663:SF56 ATMIN7 0 1-1243
HMMPfam PF12783 Sec7_N 5.6e-38 177-332
Seg seg seg NA 208-219
1174-1182
Wolf-PSORT
Lj4g3v2215540.1	E.R. 5, chlo 4, nucl 2, cyto 1, mito 1, plas 1, cysk_nucl 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2215540.1