Miyakogusa Predicted Gene

Lj4g3v2215340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LYB2_SOYBN 644 92.1 94.4 (tr|I1LYB2) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G20850.1 615 86.3 92.7 | Symbols: ATRAD51, RAD51 | RAS associated with diabetes protein 51 | chr5:7070758-7072860 REVERSE LENGTH=342
Medicago Medtr4g124560.1 640 90.9 95.0 | DNA repair RAD51-like protein | HC | chr4:51555032-51558129 | 20130731
Soybean Glyma13g17530.1 644 92.1 94.4  
LJGI gnl|LJGI|TC72188 2040 100.0 100.0 homologue to UniRef100_Q0PCG3 Cluster: RAD51 homolog; n=1; Populus nigra|Rep: RAD51 homolog - Populus nigra (Lombardy poplar), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2215340.1 length: 342 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 5.1e-07 122-309
IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical
Molecular Function GO:0000166 nucleotide binding    
superfamily SSF47794 Rad51 1.4e-18 19-88
IPR011941 DNA recombination/repair protein Rad51
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006281 DNA repair    
Molecular Function GO:0008094 DNA-dependent ATPase activity    
HMMPanther PTHR22942:SF12 DNA 1.6e-230 1-342
HMMTigr TIGR02239 recomb_RAD51: 3.4e-176 28-342
IPR013632 DNA recombination and repair protein Rad51, C-terminal
HMMPfam PF08423 Rad51 2.2e-138 81-341
IPR016467 DNA recombination and repair protein, RecA-like
HMMPIR PIRSF005856 DNA 1.6e-186 1-342
IPR020587 DNA recombination/repair protein RecA, monomer-monomer interface
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006259 DNA metabolic process    
Molecular Function GO:0008094 DNA-dependent ATPase activity    
ProfileScan PS50163 RECA_3 15.822 279-342
IPR020588 DNA recombination/repair protein RecA/RadB, ATP-binding domain
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006259 DNA metabolic process    
Molecular Function GO:0008094 DNA-dependent ATPase activity    
ProfileScan PS50162 RECA_2 38.422 101-276
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.3e-65 101-342
no_ID  
Gene3D G3DSA:1.10.150.20 no description 1.6e-30 26-96
Gene3D G3DSA:3.40.50.300 no description 5.1e-88 102-341
HMMPanther PTHR22942 RECA/RAD51/RADA 1.6e-230 1-342
Seg seg seg NA 11-22
Wolf-PSORT
Lj4g3v2215340.1	cyto 8, nucl 2, pero 2, mito 1, plas 1, cysk_nucl 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2215340.1