Miyakogusa Predicted Gene

Lj4g3v2203590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MSA3_SOYBN 829 73.7 84.2 (tr|I1MSA3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G06000.2 513 52.8 70.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:2328000-2329610 REVERSE LENGTH=536
Medicago Medtr4g040410.1 647 63.2 79.5 | PPR containing plant-like protein | HC | chr4:14488883-14491771 | 20130731
Soybean Glyma17g05680.1 771 75.1 85.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2203590.1 length: 550 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.016 116-144
185-213
HMMPfam PF13041 PPR_2 7.2e-14 220-266
288-337
358-407
432-475
HMMTigr TIGR00756 PPR: 1.4e-06 116-148
185-213
221-254
255-290
292-325
326-360
361-392
396-428
432-462
465-499
ProfileScan PS51375 PPR 6.106 113-147
183-217
148-182
218-252
289-323
253-288
324-358
359-393
394-428
429-459
463-497
498-528
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00032 396-519
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-124 80-528
Wolf-PSORT
Lj4g3v2203590.1	chlo 11, cyto 1, extr 1, E.R. 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2203590.1