Miyakogusa Predicted Gene
- Lj4g3v2192550.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K5N3_SOYBN |
202 |
67.4 |
80.7 |
(tr|K7K5N3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G42700.1 |
127 |
52.2 |
65.5 |
| Symbols: | AP2/B3-like transcriptional factor family protein | chr5:17122171-17124177 FORWARD LENGTH=211 |
| Medicago |
Medtr3g101520.1 |
117 |
47.8 |
66.4 |
| B3 domain transcription factor | HC | chr3:46725903-46730052 | 20130731 |
| Soybean |
Glyma01g45640.1 |
201 |
67.6 |
80.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2192550.2 |
length: 167 aa. |
| IPR003340 |
B3 DNA binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02362 |
B3 |
2.1e-14 |
44-133 |
| HMMSmart |
SM01019 |
B3 |
2.1e-15 |
43-134 |
| ProfileScan |
PS50863 |
B3 |
10.969 |
43-134 |
| IPR015300 |
DNA-binding pseudobarrel domain |
| Gene3D |
G3DSA:2.40.330.10 |
no description |
1.1e-19 |
35-134 |
| superfamily |
SSF101936 |
DNA-binding |
1.5e-21 |
37-142 |
| no_ID |
|
| HMMPanther |
PTHR31391 |
FAMILY |
1.4e-44 |
19-140 |
- Wolf-PSORT
Lj4g3v2192550.2 nucl 9, mito 3, plas 1, cysk 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2192550.2 |
|