Miyakogusa Predicted Gene

Lj4g3v2179230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SD19_LOTJA 450 88.3 88.7 (tr|I3SD19) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G20510.1 325 59.2 72.3 | Symbols: AL5 | alfin-like 5 | chr5:6939991-6942846 REVERSE LENGTH=260
Medicago Medtr2g040990.1 319 65.1 74.3 | PHD finger alfin-like protein | HC | chr2:17960762-17956593 | 20130731
Soybean Glyma13g16740.1 346 71.5 79.3  
LJGI gnl|LJGI|TC69309 1481 100.0 100.0 similar to UniRef100_A7PE09 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=4; core eudicotyledons|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2179230.1 length: 248 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 5.8e-09 194-242
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 3.1e-16 182-248
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.6e-17 187-244
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 195-241
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 8.1e-10 195-243
ProfileScan PS50016 ZF_PHD_2 9.401 192-244
IPR021998 Protein of unknown function DUF3594
HMMPfam PF12165 DUF3594 2.8e-79 11-147
no_ID  
HMMPanther PTHR12321 CPG 5e-150 10-247
HMMPanther PTHR12321:SF12 SUBFAMILY 5e-150 10-247
Seg seg seg NA 60-77
180-189
Wolf-PSORT
Lj4g3v2179230.1	chlo 7, mito 3, cyto 2, nucl 1.5, cyto_mito 1.5, cysk_nucl 1.5, mito_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2179230.1