Miyakogusa Predicted Gene
- Lj4g3v2172730.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MSF5_SOYBN |
602 |
78.4 |
85.7 |
(tr|I1MSF5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G33050.3 |
473 |
74.8 |
87.1 |
| Symbols: EDA39 | calmodulin-binding family protein | chr4:15944604-15946736 REVERSE LENGTH=488 |
| Medicago |
Medtr4g126020.1 |
562 |
78.3 |
87.2 |
| calmodulin-binding family protein | HC | chr4:52370164-52366726 | 20130731 |
| Soybean |
Glyma17g06150.1 |
602 |
78.4 |
85.7 |
|
| LJGI |
gnl|LJGI|TC57947 |
2147 |
100.0 |
100.0 |
similar to UniRef100_A7P4K6 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2172730.1 |
length: 361 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31250 |
FAMILY |
9.6e-215 |
51-344 |
| HMMPanther |
PTHR31250:SF0 |
SUBFAMILY |
9.6e-215 |
51-344 |
- Wolf-PSORT
Lj4g3v2172730.1 chlo 4, nucl 4, mito 3, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2172730.1 |
|