Miyakogusa Predicted Gene

Lj4g3v2172560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IIL3_MEDTR 366 67.0 74.1 (tr|G7IIL3) RecA OS=Medicago truncatula GN=MTR_2g039670 PE=3 SV=1
TAIR_pep AT2G19490.1 318 67.1 76.2 | Symbols: | recA DNA recombination family protein | chr2:8441732-8444006 FORWARD LENGTH=430
Medicago Medtr4g126040.1 414 75.1 79.0 | DNA repair protein RecA, putative | HC | chr4:52380345-52386177 | 20130731
Soybean Glyma17g06180.2 395 68.2 74.0  
LJGI gnl|LJGI|FS338603 458 93.1 93.1 homologue to UniRef100_A7PE62 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2172560.1 length: 288 aa.
IPR013765 DNA recombination and repair protein RecA
method AccNumber shortName E-value location
Molecular Function GO:0003697 single-stranded DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006281 DNA repair    
Biological Process GO:0009432 SOS response    
FPrintScan PR00142 RECA 6.1e-76 17-46
51-80
89-118
137-165
170-199
223-240
HMMPanther PTHR22942:SF1 DNA 1.2e-106 11-213
HMMPfam PF00154 RecA 8.2e-97 10-252
HMMTigr TIGR02012 tigrfam_recA: 6.9e-98 10-250
IPR020584 DNA recombination/repair protein RecA, conserved site
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006259 DNA metabolic process    
Molecular Function GO:0008094 DNA-dependent ATPase activity    
PatternScan PS00321 RECA_1 NA 140-148
IPR020587 DNA recombination/repair protein RecA, monomer-monomer interface
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006259 DNA metabolic process    
Molecular Function GO:0008094 DNA-dependent ATPase activity    
ProfileScan PS50163 RECA_3 27.151 128-199
IPR020588 DNA recombination/repair protein RecA/RadB, ATP-binding domain
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006259 DNA metabolic process    
Molecular Function GO:0008094 DNA-dependent ATPase activity    
ProfileScan PS50162 RECA_2 39.173 11-122
IPR023400 DNA recombination and repair protein RecA, C-terminal
Gene3D G3DSA:3.30.250.10 no description 1.9e-11 197-252
superfamily SSF54752 RecA 1.8e-09 195-253
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.8e-36 1-194
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.9e-40 11-194
HMMPanther PTHR22942 RECA/RAD51/RADA 1.2e-106 11-213
Seg seg seg NA 60-73
98-112
241-253
Wolf-PSORT
Lj4g3v2172560.1	cyto 7, chlo 5, vacu 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2172560.1