Miyakogusa Predicted Gene

Lj4g3v2140210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MSI4_SOYBN 206 71.5 80.4 (tr|I1MSI4) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G37790.1 154 62.2 79.5 | Symbols: HAT22 | Homeobox-leucine zipper protein family | chr4:17768241-17769272 FORWARD LENGTH=278
Medicago Medtr4g126900.1 153 64.3 77.6 | homeobox associated leucine zipper protein | HC | chr4:52624441-52622831 | 20130731
Soybean Glyma17g06380.1 206 71.5 80.4  
LJGI gnl|LJGI|BW598498 63.9 89.3 89.3 homologue to UniRef100_Q45RR3 Cluster: Type II homeodomain-leucine zipper protein; n=1; Medicago sativa|Rep: Type II homeodomain-leucine zipper protein - Medicago sativa (Alfalfa), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2140210.1 length: 205 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 5.6e-16 66-120
HMMSmart SM00389 Homeodomain 4.6e-15 64-126
ProfileScan PS50071 HOMEOBOX_2 16.082 62-122
IPR003106 Leucine zipper, homeobox-associated
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02183 HALZ 7.6e-10 122-158
HMMSmart SM00340 homeobox 1.4e-14 122-165
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.6e-16 51-116
superfamily SSF46689 Homeodomain-like 4.7e-17 51-120
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 97-120
no_ID  
Coil coil coiled-coil NA 114-156
HMMPanther PTHR24326 FAMILY 1.2e-37 64-180
HMMPanther PTHR24326:SF63 SUBFAMILY 1.2e-37 64-180
Seg seg seg NA 10-19
183-200
Wolf-PSORT
Lj4g3v2140210.1	nucl 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2140210.1