Miyakogusa Predicted Gene
- Lj4g3v2140190.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MK34_SOYBN |
984 |
80.1 |
85.9 |
(tr|K7MK34) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr4g126780.1 |
936 |
76.1 |
84.2 |
| cupin superfamily protein | HC | chr4:52646550-52640110 | 20130731 |
| Soybean |
Glyma13g00330.1 |
75.5 |
68.4 |
77.2 |
|
| LJGI |
gnl|LJGI|AV416064 |
825 |
100.0 |
100.0 |
similar to UniRef100_A7Q6A9 Cluster: Chromosome chr11 scaffold_56, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_56, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2140190.2 |
length: 603 aa. |
| IPR003347 |
JmjC domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF08007 |
Cupin_4 |
5.7e-22 |
271-395 |
| ProfileScan |
PS51184 |
JMJC |
17.006 |
256-410 |
| IPR013109 |
Lysine-specific demethylase NO66/MYC-induced nuclear antigen |
| HMMPanther |
PTHR13096 |
MINA53 |
8.7e-17 |
275-396 |
| no_ID |
|
| Gene3D |
G3DSA:2.60.120.650 |
no description |
4.7e-27 |
241-393 |
| HMMPanther |
PTHR13096:SF0 |
SUBFAMILY |
8.7e-17 |
275-396 |
| superfamily |
SSF51197 |
Clavaminate |
5.1e-26 |
120-418 |
- Wolf-PSORT
Lj4g3v2140190.2 chlo 4, nucl 3.5, cysk_nucl 2.5, E.R. 2, cyto 1, mito 1, plas 1, vacu 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2140190.2 |
|