Miyakogusa Predicted Gene

Lj4g3v2139650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D2KTV4_LOTJA 384 88.1 88.1 (tr|D2KTV4) Leucine rich repeat protein OS=Lotus japonicus GN=LRR PE=2 SV=1
TAIR_pep AT2G19330.1 253 65.7 77.3 | Symbols: PIRL6 | plant intracellular ras group-related LRR 6 | chr2:8372947-8374453 FORWARD LENGTH=380
Medicago Medtr4g127120.1 305 72.1 79.6 | plant intracellular ras-group-related LRR protein | HC | chr4:52730171-52726651 | 20130731
Soybean Glyma09g06920.1 298 69.2 78.4  
LJGI gnl|LJGI|TC79530 993 98.2 98.2 similar to UniRef100_A7Q698 Cluster: Chromosome chr11 scaffold_56, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr11 scaffold_56, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2139650.1 length: 226 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.014 58-73
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 8.1 53-76
77-99
100-123
124-146
147-169
170-193
no_ID  
Gene3D G3DSA:3.80.10.10 no description 4.3e-36 28-225
HMMPanther PTHR23155 LEUCINE-RICH 3e-91 29-226
HMMPanther PTHR23155:SF34 LEUCINE-RICH 3e-91 29-226
HMMPfam PF13504 LRR_7 1.2 149-164
HMMPfam PF13855 LRR_8 9.9e-08 82-136
HMMSmart SM00364 Leucine-rich 1e+02 53-72
77-96
100-119
123-142
147-166
170-189
Seg seg seg NA 42-53
147-161
superfamily SSF52058 L 6e-36 32-226
Wolf-PSORT
Lj4g3v2139650.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2139650.1