Miyakogusa Predicted Gene
- Lj4g3v2139210.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L1H1_SOYBN |
180 |
52.4 |
61.4 |
(tr|K7L1H1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G37650.1 |
138 |
45.2 |
53.7 |
| Symbols: | GRAS family transcription factor | chr2:15792623-15794779 FORWARD LENGTH=718 |
| Medicago |
Medtr7g062120.1 |
179 |
51.6 |
61.6 |
| GRAS family transcription factor | HC | chr7:22543834-22546912 | 20130731 |
| Soybean |
Glyma07g15950.1 |
180 |
52.4 |
61.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2139210.1 |
length: 143 aa. |
| IPR005202 |
Transcription factor GRAS |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03514 |
GRAS |
5.5e-10 |
4-84 |
| ProfileScan |
PS50985 |
GRAS |
11.404 |
1-143 |
| no_ID |
|
| HMMPanther |
PTHR31636 |
FAMILY |
2.2e-13 |
2-84 |
- Wolf-PSORT
Lj4g3v2139210.1 cyto 6.5, cyto_E.R. 4, nucl 2, chlo 1, plas 1, extr 1, vacu 1, cysk 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2139210.1 |
|