Miyakogusa Predicted Gene

Lj4g3v2139160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVL8_SOYBN 555 72.5 79.8 (tr|I1LVL8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G26000.1 421 58.6 74.2 | Symbols: PEP | RNA-binding KH domain-containing protein | chr4:13197280-13199539 FORWARD LENGTH=495
Medicago Medtr4g127380.1 540 71.6 80.2 | poly(rC)-binding-like protein | HC | chr4:52864244-52858917 | 20130731
Soybean Glyma13g00510.1 555 72.5 79.8  
LJGI gnl|LJGI|TC72222 1897 100.0 100.0 similar to UniRef100_A7QUD9 Cluster: Chromosome chr11 scaffold_177, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_177, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2139160.1 length: 403 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 4.8e-11 37-110
125-200
299-368
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 2.7e-10 41-93
129-194
303-363
ProfileScan PS50084 KH_TYPE_1 13.523 38-105
126-195
300-363
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 3.3e-12 28-93
127-201
300-371
HMMPanther PTHR10288 KH 1.6e-78 18-377
HMMPanther PTHR10288:SF53 KH 1.6e-78 18-377
Seg seg seg NA 18-28
262-274
280-293
superfamily SSF54791 Eukaryotic 9.9e-13 287-369
26-111
114-207
Wolf-PSORT
Lj4g3v2139160.1	cyto 8, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2139160.1