Miyakogusa Predicted Gene
- Lj4g3v2137090.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MSL6_SOYBN |
330 |
71.9 |
81.4 |
(tr|I1MSL6) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G57200.1 |
301 |
65.5 |
77.7 |
| Symbols: | ENTH/ANTH/VHS superfamily protein | chr5:23177696-23180601 FORWARD LENGTH=591 |
| Medicago |
Medtr2g037980.1 |
320 |
69.2 |
80.1 |
| clathrin assembly plant-like protein | HC | chr2:16484005-16479782 | 20130731 |
| Soybean |
Glyma17g06700.1 |
330 |
71.9 |
81.4 |
|
| LJGI |
gnl|LJGI|TC61608 |
52.0 |
94.1 |
94.1 |
homologue to UniRef100_A7P3R3 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2137090.1 |
length: 219 aa. |
| IPR008942 |
ENTH/VHS |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.40.90 |
no description |
8.8e-43 |
30-157 |
| superfamily |
SSF48464 |
ENTH/VHS |
6.1e-36 |
30-164 |
| IPR011417 |
AP180 N-terminal homology (ANTH) domain |
| Molecular Function |
GO:0005543 |
phospholipid binding |
|
|
| HMMPfam |
PF07651 |
ANTH |
1.7e-55 |
30-219 |
| IPR013809 |
Epsin-like, N-terminal |
| HMMSmart |
SM00273 |
Epsin |
2.1e-38 |
30-161 |
| ProfileScan |
PS50942 |
ENTH |
36.018 |
24-161 |
| IPR014712 |
Clathrin adaptor, phosphoinositide-binding, GAT-like |
| Molecular Function |
GO:0005545 |
1-phosphatidylinositol binding |
|
|
| Cellular Component |
GO:0030118 |
clathrin coat |
|
|
| Molecular Function |
GO:0030276 |
clathrin binding |
|
|
| Biological Process |
GO:0048268 |
clathrin coat assembly |
|
|
| Gene3D |
G3DSA:1.20.58.150 |
no description |
0.00019 |
183-219 |
| no_ID |
|
| HMMPanther |
PTHR22951 |
CLATHRIN |
4.3e-114 |
4-219 |
| HMMPanther |
PTHR22951:SF1 |
CLATHRIN |
4.3e-114 |
4-219 |
| Seg |
seg |
seg |
NA |
185-197 |
| superfamily |
SSF89009 |
GAT-like |
2.9e-07 |
175-219 |
- Wolf-PSORT
Lj4g3v2137090.1 cyto 4, nucl 3, cyto_plas 3, chlo 2, mito 2, plas 2, chlo_mito 2, mito_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2137090.1 |
|