Miyakogusa Predicted Gene

Lj4g3v2137060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVM5_SOYBN 1121 67.5 74.2 (tr|I1LVM5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G29950.1 707 49.9 62.9 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:14657464-14660370 FORWARD LENGTH=828
Medicago Medtr4g127450.1 1131 69.3 77.4 | Ypt/Rab-GAP domain of gyp1p superfamily protein | HC | chr4:52908354-52902885 | 20130731
Soybean Glyma13g00570.1 1117 68.7 75.4  
LJGI gnl|LJGI|TC63322 1213 99.4 99.4 similar to UniRef100_A7QXM9 Cluster: Chromosome undetermined scaffold_226, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_226, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2137060.1 length: 829 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 1.1e-11 122-208
276-378
HMMSmart SM00164 Domain 1.1e-20 24-423
ProfileScan PS50086 TBC_RABGAP 23.973 33-377
superfamily SSF47923 Ypt/Rab-GAP 2.1e-26 312-454
38-337
no_ID  
Coil coil coiled-coil NA 62-83
Gene3D G3DSA:1.10.8.270 no description 6.4e-20 276-288
HMMPanther PTHR22957 TBC1 5.4e-185 38-601
HMMPanther PTHR22957:SF24 MICROTUBULE-ASSOCIATED 5.4e-185 38-601
Seg seg seg NA 8-21
53-59
72-85
325-341
665-676
747-757
Wolf-PSORT
Lj4g3v2137060.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2137060.1