Miyakogusa Predicted Gene

Lj4g3v2137050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D7UBJ1_VITVI 754 65.9 78.1 (tr|D7UBJ1) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00560 PE=4 SV=1
TAIR_pep AT2G13600.1 355 32.2 52.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:5671493-5673586 FORWARD LENGTH=697
Medicago Medtr4g011570.1 365 36.2 58.1 | pentatricopeptide (PPR) repeat protein | HC | chr4:2848688-2851472 | 20130731
Soybean Glyma02g11370.1 367 35.0 56.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2137050.1 length: 544 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.2 38-64
66-92
136-155
237-263
265-292
338-364
440-462
HMMPfam PF13041 PPR_2 1.6e-12 162-202
365-411
HMMTigr TIGR00756 PPR: 4.4e-09 38-64
164-197
367-401
ProfileScan PS51375 PPR 6.062 64-94
33-63
96-130
162-196
131-161
263-298
232-262
365-399
334-364
400-430
436-470
502-536
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-180 18-542
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.3e-180 18-542
Wolf-PSORT
Lj4g3v2137050.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2137050.1