Miyakogusa Predicted Gene
- Lj4g3v2133910.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LVM9_SOYBN |
328 |
80.3 |
86.4 |
(tr|I1LVM9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G19160.1 |
270 |
64.6 |
77.8 |
| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr2:8310921-8313595 FORWARD LENGTH=394 |
| Medicago |
Medtr4g127550.1 |
319 |
79.9 |
85.4 |
| core-2/I-branching enzyme | HC | chr4:52954458-52961485 | 20130731 |
| Soybean |
Glyma13g00610.2 |
328 |
80.3 |
86.4 |
|
| LJGI |
gnl|LJGI|TC77044 |
803 |
96.9 |
96.9 |
similar to UniRef100_A7QLA8 Cluster: Chromosome chr11 scaffold_118, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_118, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2133910.2 |
length: 198 aa. |
| IPR003406 |
Glycosyl transferase, family 14 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008375 |
acetylglucosaminyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF02485 |
Branch |
4.1e-26 |
107-195 |
| no_ID |
|
| HMMPanther |
PTHR31042 |
FAMILY |
2.9e-81 |
1-195 |
| HMMPanther |
PTHR31042:SF0 |
SUBFAMILY |
2.9e-81 |
1-195 |
| Seg |
seg |
seg |
NA |
32-45 |
- Wolf-PSORT
Lj4g3v2133910.2 cyto 7, nucl 3, E.R. 2, chlo 1, extr 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2133910.2 |
|