Miyakogusa Predicted Gene
- Lj4g3v2120640.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LWU7_SOYBN |
283 |
75.5 |
83.5 |
(tr|K7LWU7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G30160.2 |
216 |
58.4 |
71.3 |
| Symbols: VLN4 | villin 4 | chr4:14754528-14759511 FORWARD LENGTH=983 |
| Medicago |
Medtr4g127660.1 |
283 |
76.2 |
84.1 |
| actin filament bundling protein P-115-ABP | HC | chr4:53041132-53049570 | 20130731 |
| Soybean |
Glyma13g00770.1 |
284 |
75.5 |
83.5 |
|
| LJGI |
gnl|LJGI|TC69507 |
170 |
79.3 |
79.3 |
homologue to UniRef100_A2Q391 Cluster: Villin headpiece; Gelsolin region; n=1; Medicago truncatula|Rep: Villin headpiece; Gelsolin region - Medicago truncatula (Barrel medic), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2120640.1 |
length: 188 aa. |
| IPR003128 |
Villin headpiece |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003779 |
actin binding |
|
|
| Biological Process |
GO:0007010 |
cytoskeleton organization |
|
|
| Gene3D |
G3DSA:1.10.950.10 |
no description |
7.8e-22 |
119-188 |
| HMMPfam |
PF02209 |
VHP |
1.8e-16 |
153-188 |
| HMMSmart |
SM00153 |
Villin |
1.4e-16 |
153-188 |
| ProfileScan |
PS51089 |
HP |
19.845 |
123-188 |
| superfamily |
SSF47050 |
VHP, |
9.9e-25 |
110-188 |
| IPR007122 |
Villin/Gelsolin |
| Molecular Function |
GO:0003779 |
actin binding |
|
|
| HMMPanther |
PTHR11977 |
VILLIN |
1.6e-41 |
1-188 |
| no_ID |
|
| HMMPanther |
PTHR11977:SF9 |
VILLIN |
1.6e-41 |
1-188 |
- Wolf-PSORT
Lj4g3v2120640.1 nucl 6, mito 4, chlo 3, cysk_nucl 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2120640.1 |
|