Miyakogusa Predicted Gene

Lj4g3v2120450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LZI3_SOYBN 1036 83.5 87.5 (tr|I1LZI3) Lysine--tRNA ligase OS=Glycine max PE=3 SV=1
TAIR_pep AT3G11710.1 902 77.7 87.1 | Symbols: ATKRS-1 | lysyl-tRNA synthetase 1 | chr3:3702359-3705613 REVERSE LENGTH=626
Medicago Medtr2g036600.1 982 78.8 84.6 | lysine-tRNA ligase-like protein | HC | chr2:15835394-15843395 | 20130731
Soybean Glyma13g21870.1 1036 83.5 87.5  
LJGI gnl|LJGI|TC59705 1011 96.5 96.5 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase, class-2; Aminoacyl-transfer RNA synthetase, class II; n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase, class-2; Aminoacyl-transfer RNA synthetase, class II - Medicago truncatula (Barrel medic), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2120450.1 length: 597 aa.
IPR002313 Lysine-tRNA ligase, class II
method AccNumber shortName E-value location
Molecular Function GO:0004824 lysine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006430 lysyl-tRNA aminoacylation    
HAMAP MF_00252 Lys_tRNA_synth_class2 37.655 73-596
HMMPanther PTHR22594:SF4 LYSYL-TRNA 0 4-597
HMMTigr TIGR00499 lysS_bact: 1.3e-154 235-596
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 3.9e-94 243-594
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 3.1e-12 120-198
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 25.884 270-595
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.3e-41 68-209
superfamily SSF50249 Nucleic 4.4e-42 64-209
IPR018149 Lysyl-tRNA synthetase, class II, C-terminal
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004824 lysine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006430 lysyl-tRNA aminoacylation    
FPrintScan PR00982 TRNASYNTHLYS 2.6e-37 280-290
296-312
325-338
343-360
478-494
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 0 4-597
no_ID  
Coil coil coiled-coil NA 19-56
Gene3D G3DSA:3.30.930.10 no description 7.6e-120 241-592
Seg seg seg NA 22-53
211-227
superfamily SSF55681 Class 9.1e-119 243-595
Wolf-PSORT
Lj4g3v2120450.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2120450.1