Miyakogusa Predicted Gene

Lj4g3v2120370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S2B8_LOTJA 366 99.4 100.0 (tr|I3S2B8) Ribulose bisphosphate carboxylase small chain OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G38430.1 194 57.5 72.5 | Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181
Medicago Medtr4g127870.1 290 78.5 86.0 | ribulose bisphosphate carboxylase small chain | HC | chr4:53193172-53191727 | 20130731
Soybean Glyma13g00910.1 303 81.4 86.6  
LJGI gnl|LJGI|TC64166 1041 100.0 100.0 similar to UniRef100_A7Q6D7 Cluster: Ribulose bisphosphate carboxylase small chain; n=1; Vitis vinifera|Rep: Ribulose bisphosphate carboxylase small chain - Vitis vinifera (Grape), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2120370.1 length: 173 aa.
IPR000894 Ribulose bisphosphate carboxylase small chain, domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.190.10 no description 5.5e-57 48-170
HMMPfam PF00101 RuBisCO_small 5e-40 58-166
HMMSmart SM00961 Ribulose 1.1e-37 58-166
superfamily SSF55239 RuBisCO, 1e-51 48-169
IPR024681 Ribulose bisphosphate carboxylase, small chain
FPrintScan PR00152 RUBISCOSMALL 7.5e-50 8-25
36-54
57-83
85-100
106-135
140-166
no_ID  
HMMPanther PTHR31262 FAMILY 5.7e-71 40-166
HMMPanther PTHR31262:SF0 SUBFAMILY 5.7e-71 40-166
Wolf-PSORT
Lj4g3v2120370.1	chlo 10, nucl 1, cyto 1, extr 1, vacu 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2120370.1