Miyakogusa Predicted Gene

Lj4g3v2046230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MSU3_SOYBN 754 88.8 93.3 (tr|I1MSU3) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G15560.1 616 72.4 83.0 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARD LENGTH=717
Medicago Medtr8g068265.1 647 76.1 86.3 | 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr8:28466086-28471025 | 20130731
Soybean Glyma17g07400.1 753 88.8 93.3  
LJGI gnl|LJGI|TC64910 65.9 86.3 86.3 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor; n=1; Medicago truncatula|Rep: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor - Medicago truncatula (Barrel medic), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2046230.1 length: 416 aa.
IPR005475 Transketolase-like, pyrimidine-binding domain
method AccNumber shortName E-value location
HMMPfam PF02779 Transket_pyr 6.8e-42 92-252
HMMSmart SM00861 Transketolase, 2.1e-64 91-256
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 1.2e-33 270-393
IPR005477 Deoxyxylulose-5-phosphate synthase
Molecular Function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
HMMPfam PF13292 DXP_synthase_N 6.8e-09 11-53
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 1.7e-35 264-402
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 2.2e-34 270-400
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 197-213
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.4e-73 60-269
HMMPanther PTHR11624 DEHYDROGENASE 1.8e-191 2-416
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 1.8e-191 2-416
Seg seg seg NA 352-362
405-416
superfamily SSF52518 Thiamin 2.9e-09 62-252
12-81
Wolf-PSORT
Lj4g3v2046230.1	cyto 6, chlo 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2046230.1