Miyakogusa Predicted Gene

Lj4g3v2023890.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MSW2_SOYBN 279 50.3 63.1 (tr|I1MSW2) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT4G16850.1 134 35.0 51.6 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:9480699-9481640 FORWARD LENGTH=313

Medicago Medtr4g129330.1 251 45.4 59.3 | transmembrane protein, putative | HC | chr4:53878983-53877788 | 20130731

Soybean Glyma17g07570.1 257 54.4 67.7

LJGI gnl|LJGI|TC82370 555 100.0 100.0 homologue to UniRef100_Q492H9 Cluster: NADH dehydrogenase I chain E; n=1; Candidatus Blochmannia pennsylvanicus str. BPEN|Rep: NADH dehydrogenase I chain E - Blochmannia pennsylvanicus (strain BPEN), partial (7%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2023890.1 length: 303 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 37-58
106-117
186-197
223-236

Wolf-PSORT

Lj4g3v2023890.1 cyto 7, vacu 3.5, cyto_pero 3.5, E.R._vacu 2.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2023890.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MSW2_SOYBN	279	50.3	63.1	(tr\|I1MSW2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT4G16850.1	134	35.0	51.6	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:9480699-9481640 FORWARD LENGTH=313
Medicago	Medtr4g129330.1	251	45.4	59.3	\| transmembrane protein, putative \| HC \| chr4:53878983-53877788 \| 20130731
Soybean	Glyma17g07570.1	257	54.4	67.7
LJGI	gnl\|LJGI\|TC82370	555	100.0	100.0	homologue to UniRef100_Q492H9 Cluster: NADH dehydrogenase I chain E; n=1; Candidatus Blochmannia pennsylvanicus str. BPEN\|Rep: NADH dehydrogenase I chain E - Blochmannia pennsylvanicus (strain BPEN), partial (7%)

no_ID
Lj4g3v2023890.1				length: 303 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	37-58 106-117 186-197 223-236