Miyakogusa Predicted Gene

Lj4g3v2023790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVV7_SOYBN 778 78.7 82.8 (tr|I1LVV7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G57740.1 573 60.2 70.1 | Symbols: XBAT32 | XB3 ortholog 2 in Arabidopsis thaliana | chr5:23394789-23397145 REVERSE LENGTH=508
Medicago Medtr4g129470.1 791 77.9 81.6 | E3 ubiquitin-protein ligase XBOS32 | HC | chr4:53926061-53932514 | 20130731
Soybean Glyma13g01480.1 778 78.7 82.8  
LJGI gnl|LJGI|TC73136 1598 99.9 99.9 similar to UniRef100_A7PFF7 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2023790.1 length: 508 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.0021 319-369
ProfileScan PS50089 ZF_RING_2 9.730 319-370
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
FPrintScan PR01415 ANKYRIN 7.4e-05 118-133
194-208
HMMSmart SM00248 ankyrin 2.2e-05 50-79
83-112
117-148
178-207
221-250
ProfileScan PS50088 ANK_REPEAT 12.155 50-82
83-115
117-138
178-210
221-253
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 334-343
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 3.1e-53 20-277
HMMPfam PF12796 Ank_2 3.6e-11 20-112
114-206
211-268
ProfileScan PS50297 ANK_REP_REGION 42.441 20-262
superfamily SSF48403 Ankyrin 4.9e-52 14-276
no_ID  
HMMPanther PTHR24128 FAMILY 2.7e-271 1-508
HMMPanther PTHR24128:SF7 SUBFAMILY 2.7e-271 1-508
Seg seg seg NA 282-298
348-357
421-447
477-486
superfamily SSF57850 RING/U-box 1.2e-07 287-376
Wolf-PSORT
Lj4g3v2023790.1	chlo 5, extr 4, nucl 2, cyto 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2023790.1