Miyakogusa Predicted Gene
- Lj4g3v2022720.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MSX3_SOYBN |
635 |
84.4 |
88.5 |
(tr|I1MSX3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G57800.1 |
551 |
72.4 |
81.7 |
| Symbols: FLP1, YRE, CER3, WAX2 | Fatty acid hydroxylase superfamily | chr5:23420589-23423832 FORWARD LENGTH=632 |
| Medicago |
Medtr4g129630.1 |
631 |
82.2 |
89.1 |
| fatty acid hydroxylase superfamily protein | HC | chr4:54015472-54009867 | 20130731 |
| Soybean |
Glyma17g07670.1 |
635 |
84.4 |
88.5 |
|
| LJGI |
gnl|LJGI|BP046732 |
827 |
100.0 |
100.0 |
similar to UniRef100_A7PFH6 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2022720.1 |
length: 366 aa. |
| IPR016040 |
NAD(P)-binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
5.7e-06 |
193-255 |
| IPR021940 |
Uncharacterised domain Wax2, C-terminal |
| HMMPfam |
PF12076 |
Wax2_C |
9.1e-65 |
193-363 |
| no_ID |
|
| HMMPanther |
PTHR11863 |
STEROL |
8.3e-60 |
1-200 |
| HMMPanther |
PTHR11863:SF1 |
STEROL |
8.3e-60 |
1-200 |
| Seg |
seg |
seg |
NA |
319-331 |
| superfamily |
SSF51735 |
NAD(P)-binding |
2.9e-07 |
186-262 |
- Wolf-PSORT
Lj4g3v2022720.1 chlo 3, mito 3, chlo_mito 3, cyto 2, plas 2, E.R. 2, E.R._plas 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2022720.1 |
Not targeted |
-33.564 |
-0.420 |
-3.283 |
38.38% |
-29.860
|