Miyakogusa Predicted Gene

Lj4g3v2003000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGS5_SOYBN 1933 83.9 88.6 (tr|I1JGS5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G30790.1 1342 60.3 73.9 | Symbols: | INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). | chr4:14993383-14997785 REVERSE LENGTH=1148
Medicago Medtr4g130370.1 1876 80.8 87.4 | autophagy-related protein | HC | chr4:54314660-54307709 | 20130731
Soybean Glyma02g36800.2 1933 83.9 88.6  
LJGI gnl|LJGI|TC78483 1473 99.7 99.7 similar to UniRef100_A7PFL5 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2003000.1 length: 1140 aa.
IPR019460 Autophagy-related protein 11
method AccNumber shortName E-value location
HMMPfam PF10377 ATG11 1.7e-18 994-1128
no_ID  
Coil coil coiled-coil NA 653-681
826-889
973-1016
Seg seg seg NA 121-134
330-338
541-558
superfamily SSF54236 Ubiquitin-like 8.1e-07 5-106
Wolf-PSORT
Lj4g3v2003000.1	chlo 7, nucl 3, cyto 1, plas 1, extr 1, E.R. 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2003000.1