Miyakogusa Predicted Gene

Lj4g3v2000910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1MT07_SOYBN 1344 82.2 89.7 (tr|I1MT07) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G30700.1 1054 63.8 80.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:14962617-14964995 REVERSE LENGTH=792
Medicago Medtr4g130500.1 1333 82.0 89.8 | pentatricopeptide (PPR) repeat protein | HC | chr4:54376407-54379381 | 20130731
Soybean Glyma17g07990.1 1344 82.2 89.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2000910.1 length: 775 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.24 137-164
269-297
545-566
HMMPfam PF13041 PPR_2 5.3e-11 165-208
367-414
467-515
HMMPfam PF13812 PPR_3 0.015 442-467
HMMTigr TIGR00756 PPR: 0.0018 167-200
269-297
370-402
442-468
470-503
505-533
ProfileScan PS51375 PPR 6.062 66-101
165-199
134-164
266-300
235-265
367-401
336-366
402-436
468-502
437-467
503-533
539-569
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.9e-06 539-628
no_ID  
HMMPanther PTHR24015 FAMILY 0 33-775
HMMPanther PTHR24015:SF120OS05G0353300 PROTEIN 0 33-775
HMMPfam PF14432 DYW_deaminase 8.5e-18 653-765
superfamily SSF48452 TPR-like 9.8e-06 437-617
Wolf-PSORT
Lj4g3v2000910.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2000910.1