Miyakogusa Predicted Gene

Lj4g3v1983600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MKD0_SOYBN 1061 80.9 85.3 (tr|K7MKD0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G57940.2 949 71.4 79.4 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated channel 5 | chr5:23457116-23460439 FORWARD LENGTH=717
Medicago Medtr4g130820.1 1056 79.7 85.3 | cyclic nucleotide-gated ion channel-like protein | HC | chr4:54512958-54519466 | 20130731
Soybean Glyma17g08120.1 1061 80.9 85.3  
LJGI gnl|LJGI|TC62328 1223 98.8 98.8 similar to UniRef100_A7PFR5 Cluster: Chromosome chr11 scaffold_14, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_14, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1983600.1 length: 653 aa.
IPR000595 Cyclic nucleotide-binding domain
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 8.7e-10 526-621
HMMSmart SM00100 Cyclic 1.9e-13 505-636
ProfileScan PS50042 CNMP_BINDING_3 13.939 505-589
IPR005821 Ion transport domain
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00520 Ion_trans 1.4e-24 153-422
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 1.9e-27 503-621
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 1.3e-36 430-638
no_ID  
Gene3D G3DSA:1.10.287.630 no description 9.5e-11 437-496
Gene3D G3DSA:1.10.287.70 no description 8.4e-23 366-427
HMMPanther PTHR10217 VOLTAGE 9.3e-299 89-652
HMMPanther PTHR10217:SF7 CYCLIC 9.3e-299 89-652
Seg seg seg NA 67-83
106-109
271-283
407-420
450-462
superfamily SSF81324 Voltage-gated 1.4e-36 100-442
Wolf-PSORT
Lj4g3v1983600.1	plas 8, nucl 2, vacu 2, E.R. 1, golg 1, cyto_nucl 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1983600.1