Miyakogusa Predicted Gene

Lj4g3v1983490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGP5_SOYBN 283 92.5 95.9 (tr|I1JGP5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G13950.1 261 85.6 93.2 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A | eukaryotic elongation factor 5A-1 | chr1:4773631-4774668 FORWARD LENGTH=158
Medicago Medtr4g130917.1 273 89.0 94.5 | eukaryotic translation initiation factor 5A | HC | chr4:54581914-54579116 | 20130731
Soybean Glyma02g36500.3 283 92.5 95.9  
LJGI gnl|LJGI|BP057255 668 99.4 99.4 homologue to UniRef100_Q945F4 Cluster: Eukaryotic translation initiation factor 5A-2; n=1; Medicago sativa|Rep: Eukaryotic translation initiation factor 5A-2 - Medicago sativa (Alfalfa), partial (80%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1983490.1 length: 146 aa.
IPR001884 Translation elongation factor IF5A
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0008612 peptidyl-lysine modification to hypusine    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
HMMPIR PIRSF003025 Translation 3.8e-83 1-146
HMMPanther PTHR11673 TRANSLATION 2.7e-93 2-146
HMMTigr TIGR00037 eIF_5A: 1.1e-38 17-146
IPR008991 Translation protein SH3-like domain
superfamily SSF50104 Translation 1.4e-25 14-93
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.8e-27 86-146
superfamily SSF50249 Nucleic 1.7e-22 86-146
IPR014722 Ribosomal protein L2 domain 2
Gene3D G3DSA:2.30.30.30 no description 7.4e-39 15-84
IPR019769 Translation elongation factor, IF5A, hypusine site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0006452 translational frameshifting    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
PatternScan PS00302 IF5A_HYPUSINE NA 50-57
IPR020189 Translation elongation factor, IF5A C-terminal
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0006452 translational frameshifting    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
HMMPfam PF01287 eIF-5a 3.4e-26 85-146
Wolf-PSORT
Lj4g3v1983490.1	cyto 9, chlo 3, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1983490.1