Miyakogusa Predicted Gene

Lj4g3v1970880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D5LXJ0_LOTJA 787 98.5 98.7 (tr|D5LXJ0) CIP73 protein OS=Lotus japonicus GN=CIP73 PE=2 SV=1
TAIR_pep AT5G25270.1 297 46.8 60.3 | Symbols: | Ubiquitin-like superfamily protein | chr5:8757577-8762002 REVERSE LENGTH=658
Medicago Medtr4g116370.5 586 77.6 85.4 | scythe protein ubiquitin-like domain protein | HC | chr4:48190772-48203313 | 20130731
Soybean Glyma17g11440.2 574 76.6 83.6  
LJGI gnl|LJGI|FS326583 1199 100.0 100.0 similar to UniRef100_A7QS28 Cluster: Chromosome undetermined scaffold_155, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_155, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1970880.1 length: 431 aa.
IPR000626 Ubiquitin
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 1.6e-18 27-94
HMMSmart SM00213 Ubiquitin 2.5e-23 22-93
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 20.697 22-97
IPR019956 Ubiquitin subgroup
FPrintScan PR00348 UBIQUITIN 5.1e-07 32-52
53-73
74-95
no_ID  
Gene3D G3DSA:3.10.20.90 no description 1.3e-22 15-95
HMMPanther PTHR15204 SCYTHE/BAT3 4.5e-34 1-141
HMMPanther PTHR15204:SF0 SUBFAMILY 4.5e-34 1-141
superfamily SSF54236 Ubiquitin-like 8.8e-25 22-113
Wolf-PSORT
Lj4g3v1970880.1	cyto 7, nucl 3, chlo 2, extr 1, vacu 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1970880.1