Miyakogusa Predicted Gene

Lj4g3v1957770.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M068_SOYBN 723 76.4 83.8 (tr|K7M068) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G32060.1 507 69.5 85.3 | Symbols: | calcium-binding EF hand family protein | chr4:15501134-15503321 FORWARD LENGTH=498
Medicago Medtr4g116190.1 707 75.0 84.3 | calcium-binding EF hand protein | HC | chr4:48065719-48063074 | 20130731
Soybean Glyma13g23280.1 664 81.5 88.7  
LJGI gnl|LJGI|AU089291 989 99.6 99.6 similar to UniRef100_A7QS40 Cluster: Chromosome undetermined scaffold_155, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_155, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1957770.1 length: 464 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13202 EF_hand_3 0.0064 183-201
HMMSmart SM00054 EF-hand, 0.34 180-208
214-242
298-326
406-434
ProfileScan PS50222 EF_HAND_2 11.919 210-245
183-208
294-329
349-368
402-437
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 1.4e-12 180-230
294-310
311-434
HMMPfam PF13499 EF_hand_5 1.7e-07 218-320
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 223-235
415-427
189-201
no_ID  
HMMPanther PTHR12294 EF 1.5e-171 80-463
HMMPanther PTHR12294:SF1 CALCIUM 1.5e-171 80-463
HMMPfam PF13833 EF_hand_6 8.2e-10 382-433
Seg seg seg NA 21-36
56-65
superfamily SSF47473 EF-hand 2.4e-16 102-340
299-434
Wolf-PSORT
Lj4g3v1957770.1	chlo 6, nucl 3, mito 2.5, cysk_nucl 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1957770.1