Miyakogusa Predicted Gene
- Lj4g3v1936630.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7FKP8_MEDTR |
153 |
79.5 |
89.8 |
(tr|B7FKP8) Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT5G54000.1 |
104 |
53.6 |
73.8 |
| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:21917776-21919064 REVERSE LENGTH=349 |
| Medicago |
Medtr4g116010.1 |
151 |
83.1 |
92.8 |
| flavonol synthase/flavanone 3-hydroxylase | HC | chr4:47959682-47957364 | 20130731 |
| Soybean |
Glyma17g11690.1 |
140 |
77.1 |
88.0 |
|
| LJGI |
gnl|LJGI|TC69669 |
256 |
88.2 |
88.2 |
weakly similar to UniRef100_A7QTL7 Cluster: Chromosome chr11 scaffold_170, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_170, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1936630.1 |
length: 120 aa. |
| IPR026992 |
Non-haem dioxygenase N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14226 |
DIOX_N |
3.6e-15 |
25-103 |
| IPR027443 |
Isopenicillin N synthase-like |
| Gene3D |
G3DSA:2.60.120.330 |
no description |
7.8e-19 |
25-108 |
| no_ID |
|
| HMMPanther |
PTHR10209 |
OXIDOREDUCTASE, |
2.1e-20 |
25-108 |
| HMMPanther |
PTHR10209:SF55 |
OXIDOREDUCTASE, |
2.1e-20 |
25-108 |
| Seg |
seg |
seg |
NA |
1-16 |
| superfamily |
SSF51197 |
Clavaminate |
2.9e-16 |
25-108 |
- Wolf-PSORT
Lj4g3v1936630.1 chlo 6, extr 4, nucl 1, cyto 1, vacu 1, E.R. 1, cyto_nucl 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1936630.1 |
|