Miyakogusa Predicted Gene
- Lj4g3v1932130.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IJW3_MEDTR |
253 |
91.2 |
95.6 |
(tr|G7IJW3) Vacuolar protein sorting-associated protein OS=Medicago truncatula GN=MTR_2g007250 PE=4 SV=1 |
| TAIR_pep |
AT5G24740.1 |
199 |
72.6 |
85.2 |
| Symbols: | Protein of unknown function (DUF1162) | chr5:8470073-8489703 REVERSE LENGTH=3464 |
| Medicago |
Medtr2g007250.1 |
254 |
91.2 |
95.6 |
| vacuolar protein sorting-associated protein, putative | HC | chr2:875474-913892 | 20130731 |
| Soybean |
Glyma13g24310.1 |
251 |
91.9 |
97.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1932130.1 |
length: 136 aa. |
| IPR015412 |
Autophagy-related, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09333 |
ATG_C |
6.2e-05 |
3-134 |
| IPR026847 |
Vacuolar protein sorting-associated protein 13 |
| HMMPanther |
PTHR16166 |
VACUOLAR |
3.5e-69 |
2-136 |
| no_ID |
|
| HMMPanther |
PTHR16166:SF7 |
GB |
3.5e-69 |
2-136 |
- Wolf-PSORT
Lj4g3v1932130.1 chlo 9, mito 2, nucl 1, extr 1, vacu 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1932130.1 |
|