Miyakogusa Predicted Gene

Lj4g3v1893220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JFF4_MEDTR 1131 72.1 79.8 (tr|G7JFF4) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g115640 PE=4 SV=1
TAIR_pep AT5G33280.1 1026 65.4 75.3 | Symbols: | Voltage-gated chloride channel family protein | chr5:12549280-12552305 FORWARD LENGTH=765
Medicago Medtr4g115640.1 1131 72.1 79.8 | ClC chloride channel family protein | HC | chr4:47782473-47777950 | 20130731
Soybean Glyma13g23080.2 1117 71.8 79.6  
LJGI gnl|LJGI|AI967630 854 99.5 99.5 similar to UniRef100_A7QTN4 Cluster: Chromosome chr11 scaffold_170, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_170, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1893220.1 length: 780 aa.
IPR000644 Cystathionine beta-synthase, core
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00571 CBS 0.0016 578-637
697-741
HMMSmart SM00116 Domain 0.87 585-638
696-747
ProfileScan PS51371 CBS 9.271 573-643
692-753
IPR001807 Chloride channel, voltage gated
Molecular Function GO:0005247 voltage-gated chloride channel activity    
Biological Process GO:0006821 chloride transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00762 CLCHANNEL 2.2e-60 144-161
175-194
239-258
464-484
496-512
514-533
552-566
HMMPfam PF00654 Voltage_CLC 3.6e-84 131-546
IPR002251 Chloride channel ClC-plant
Molecular Function GO:0005247 voltage-gated chloride channel activity    
Biological Process GO:0006821 chloride transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01120 CLCHANNELPLT 1.3e-20 49-57
260-268
274-284
292-299
416-432
IPR014743 Chloride channel, core
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0055085 transmembrane transport    
Gene3D G3DSA:1.10.3080.10 no description 7.3e-117 420-571
superfamily SSF81340 Clc 2.8e-93 52-569
no_ID  
Gene3D G3DSA:3.10.580.10 no description 9e-11 680-742
HMMPanther PTHR11689 CHLORIDE 0 7-780
HMMPanther PTHR11689:SF11 CHLORIDE 0 7-780
Seg seg seg NA 21-32
135-152
239-248
320-334
519-540
627-640
superfamily SSF54631 CBS-domain 6.2e-08 566-648
665-743
Wolf-PSORT
Lj4g3v1893220.1	plas 8, golg 3, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1893220.1