Miyakogusa Predicted Gene
- Lj4g3v1893080.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JFE6_MEDTR |
340 |
72.7 |
88.8 |
(tr|G7JFE6) Xylogalacturonan beta-1,3-xylosyltransferase OS=Medicago truncatula GN=MTR_4g115540 PE=4 SV=1 |
| TAIR_pep |
AT5G20260.1 |
268 |
62.4 |
78.0 |
| Symbols: | Exostosin family protein | chr5:6836806-6839532 REVERSE LENGTH=458 |
| Medicago |
Medtr4g115540.1 |
340 |
72.7 |
88.8 |
| glycosyltransferase | HC | chr4:47731269-47727672 | 20130731 |
| Soybean |
Glyma17g11840.1 |
335 |
74.6 |
86.3 |
|
| LJGI |
gnl|LJGI|GO025815 |
60.0 |
88.9 |
88.9 |
similar to UniRef100_A4Q7M7 Cluster: Exostosin-like; n=1; Medicago truncatula|Rep: Exostosin-like - Medicago truncatula (Barrel medic), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1893080.3 |
length: 205 aa. |
| IPR004263 |
Exostosin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF03016 |
Exostosin |
1.5e-31 |
5-203 |
| no_ID |
|
| HMMPanther |
PTHR11062 |
EXOSTOSIN |
1e-56 |
1-204 |
| HMMPanther |
PTHR11062:SF11 |
EXOSTOSIN |
1e-56 |
1-204 |
- Wolf-PSORT
Lj4g3v1893080.3 cyto 9, nucl 1, mito 1, plas 1, extr 1, pero 1, nucl_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1893080.3 |
|