Miyakogusa Predicted Gene

Lj4g3v1881960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I3T6Y7_LOTJA 405 100.0 100.0 (tr|I3T6Y7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G32150.1 280 68.4 83.4 | Symbols: VAMP711, ATVAMP711 | vesicle-associated membrane protein 711 | chr4:15526407-15527651 REVERSE LENGTH=219
Medicago Medtr4g115390.1 357 85.6 93.3 | synaptobrevin-like protein | HC | chr4:47660120-47661511 | 20130731
Soybean Glyma13g22950.1 363 88.7 94.4  
LJGI gnl|LJGI|TC66814 1160 100.0 100.0 similar to UniRef100_A4Q7K9 Cluster: Longin-like; n=1; Medicago truncatula|Rep: Longin-like - Medicago truncatula (Barrel medic), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1881960.1 length: 195 aa.
IPR001388 Synaptobrevin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0016192 vesicle-mediated transport    
HMMPfam PF00957 Synaptobrevin 6e-22 128-194
PatternScan PS00417 SYNAPTOBREVIN NA 148-167
ProfileScan PS50892 V_SNARE 16.575 130-190
IPR010908 Longin domain
Gene3D G3DSA:3.30.450.50 no description 1.6e-32 1-112
HMMPfam PF13774 Longin 3.8e-24 28-113
ProfileScan PS50859 LONGIN 30.337 7-115
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 3.1e-31 2-123
no_ID  
Gene3D G3DSA:1.10.3840.10 no description 1.5e-26 113-194
HMMPanther PTHR21136 SNARE 4e-83 1-195
HMMPanther PTHR21136:SF8 VAMP-7 4e-83 1-195
Wolf-PSORT
Lj4g3v1881960.1	cyto 10, chlo 2, extr 1, chlo_mito 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1881960.1