Miyakogusa Predicted Gene

Lj4g3v1881780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LZQ7_SOYBN 325 60.4 70.7 (tr|I1LZQ7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G53270.5 234 48.8 63.9 | Symbols: | Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein | chr3:19750406-19752168 REVERSE LENGTH=280
Medicago Medtr4g115320.1 324 65.0 73.2 | small nuclear RNA activating complex (SNAPc), subunit SNAP43 | HC | chr4:47607868-47612751 | 20130731
Soybean Glyma13g22870.2 325 60.4 70.7  
LJGI gnl|LJGI|TC75078 642 98.9 98.9 similar to UniRef100_A7PF90 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1881780.1 length: 279 aa.
IPR019188 Small nuclear RNA activating complex (SNAPc), subunit SNAP43
method AccNumber shortName E-value location
HMMPanther PTHR15131 SMALL 4.1e-42 1-256
HMMPfam PF09808 SNAPc_SNAP43 3.7e-47 6-201
no_ID  
Coil coil coiled-coil NA 138-159
Seg seg seg NA 74-84
109-125
150-156
259-268
Wolf-PSORT
Lj4g3v1881780.1	cyto_plas 5.16667, cyto 5, plas 5, nucl_plas 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1881780.1