Miyakogusa Predicted Gene

Lj4g3v1881760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M039_SOYBN 1371 64.1 73.1 (tr|K7M039) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G42170.1 739 63.5 80.5 | Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696
Medicago Medtr4g036325.1 73.9 39.8 60.2 | hypothetical protein | LC | chr4:13081348-13082899 | 20130731
Soybean Glyma07g03280.1 602 53.3 71.7  
LJGI gnl|LJGI|BP043175 1072 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1881760.1 length: 1044 aa.
IPR003656 Zinc finger, BED-type predicted
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF02892 zf-BED 1.1e-07 525-572
HMMSmart SM00614 BED 2.7e-13 522-578
ProfileScan PS50808 ZF_BED 9.979 522-582
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 1.5e-40 679-1016
IPR025525 Domain of unknown function DUF4413
HMMPfam PF14372 DUF4413 1.1e-31 918-1016
no_ID  
HMMPanther PTHR10775 UNCHARACTERIZED 5.6e-92 511-1015
HMMPanther PTHR10775:SF11 SUBFAMILY 5.6e-92 511-1015
Seg seg seg NA 89-100
119-131
168-186
386-397
superfamily SSF57667 C2H2 3.7e-09 525-585
Wolf-PSORT
Lj4g3v1881760.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1881760.1