Miyakogusa Predicted Gene
- Lj4g3v1881330.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LZP3_SOYBN |
629 |
78.3 |
84.4 |
(tr|I1LZP3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G24150.1 |
254 |
55.6 |
67.1 |
| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:8724273-8725586 REVERSE LENGTH=343 |
| Medicago |
Medtr4g114900.1 |
587 |
73.3 |
80.4 |
| hypothetical protein | HC | chr4:47348985-47346831 | 20130731 |
| Soybean |
Glyma13g22660.1 |
629 |
78.3 |
84.4 |
|
| LJGI |
gnl|LJGI|TC71697 |
928 |
100.0 |
100.0 |
similar to UniRef100_A7PF64 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1881330.1 |
length: 405 aa. |
| IPR003101 |
Coactivator CBP, KIX domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003712 |
transcription cofactor activity |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| Gene3D |
G3DSA:1.10.246.20 |
no description |
0.0003 |
13-76 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
136-154 |
- Wolf-PSORT
Lj4g3v1881330.1 nucl 10, chlo 1, mito 1, plas 1, cysk 1, chlo_mito 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1881330.1 |
|