Miyakogusa Predicted Gene

Lj4g3v1880730.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JE38_MEDTR 295 60.6 69.9 (tr|G7JE38) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g114690 PE=4 SV=1
TAIR_pep AT5G20190.1 165 69.0 90.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:6814093-6815171 FORWARD LENGTH=290
Medicago Medtr4g114690.1 295 60.6 69.9 | TPR repeat protein | HC | chr4:47200290-47201853 | 20130731
Soybean Glyma13g23470.1 292 60.4 68.2  
LJGI gnl|LJGI|TC66484 1746 99.9 99.9 similar to UniRef100_A7QIP2 Cluster: Chromosome chr9 scaffold_104, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_104, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1880730.2 length: 293 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.1e-12 163-263
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 8.587 163-244
no_ID  
HMMPanther PTHR26312 FAMILY 1.5e-47 99-275
HMMPanther PTHR26312:SF53 SUBFAMILY 1.5e-47 99-275
HMMPfam PF13414 TPR_11 1.2e-06 191-242
Seg seg seg NA 128-149
280-292
superfamily SSF48452 TPR-like 5.9e-09 163-260
Wolf-PSORT
Lj4g3v1880730.2	nucl 9, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1880730.2