Miyakogusa Predicted Gene
- Lj4g3v1880630.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MU85_SOYBN |
281 |
78.4 |
85.4 |
(tr|I1MU85) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G25360.2 |
172 |
50.0 |
72.0 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). | chr5:8799934-8802333 REVERSE LENGTH=169 |
| Medicago |
Medtr4g114620.1 |
275 |
78.6 |
85.0 |
| DUF4050 family protein | HC | chr4:47144929-47148910 | 20130731 |
| Soybean |
Glyma17g12280.1 |
281 |
78.4 |
85.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1880630.1 |
length: 173 aa. |
| IPR025124 |
Domain of unknown function DUF4050 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF13259 |
DUF4050 |
1.6e-20 |
57-172 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
16-25 |
- Wolf-PSORT
Lj4g3v1880630.1 chlo 5, nucl 4, cyto 2, extr 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1880630.1 |
|