Miyakogusa Predicted Gene
- Lj4g3v1879160.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M082_SOYBN |
334 |
77.7 |
84.2 |
(tr|K7M082) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr4g114410.1 |
322 |
77.5 |
84.3 |
| DUF3119 family protein | HC | chr4:47039689-47036633 | 20130731 |
| Soybean |
Glyma13g23640.4 |
333 |
77.7 |
84.2 |
|
| LJGI |
gnl|LJGI|TC59647 |
1285 |
100.0 |
100.0 |
similar to UniRef100_A7PF34 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1879160.1 |
length: 215 aa. |
| IPR021467 |
Protein of unknown function DUF3119 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF11317 |
DUF3119 |
1.5e-38 |
75-205 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
100-114 |
- Wolf-PSORT
Lj4g3v1879160.1 chlo 9, nucl 1, cyto 1, plas 1, extr 1, vacu 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1879160.1 |
Not targeted |
-62.521 |
0 |
-12.994 |
91.09% |
-49.526
|