Miyakogusa Predicted Gene

Lj4g3v1876790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KNK6_SOYBN 636 64.1 74.0 (tr|K7KNK6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G02160.1 167 35.9 47.8 | Symbols: | CCCH-type zinc finger family protein | chr2:553407-555899 REVERSE LENGTH=669
Medicago Medtr4g114040.1 363 55.6 64.9 | nucleic acid-binding protein, putative | LC | chr4:46926850-46930364 | 20130731
Soybean Glyma05g08490.1 369 50.9 60.8  
LJGI gnl|LJGI|TC62462 1195 100.0 100.0 similar to UniRef100_A7PF08 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1876790.1 length: 508 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 2.8e-06 81-109
HMMPfam PF00642 zf-CCCH 3.4e-05 84-107
HMMSmart SM00356 zinc 0.00078 7-34
39-62
82-107
ProfileScan PS50103 ZF_C3H1 14.953 6-35
37-63
81-108
IPR026290 Putative E3 ubiquitin-protein ligase, makorin-related
HMMPanther PTHR11224 MAKORIN-RELATED 6.8e-47 7-105
no_ID  
HMMPanther PTHR11224:SF23 SUBFAMILY 6.8e-47 7-105
Seg seg seg NA 440-453
468-479
superfamily SSF90229 CCCH 2.4e-06 79-107
Wolf-PSORT
Lj4g3v1876790.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1876790.1