Miyakogusa Predicted Gene

Lj4g3v1833610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJI8_LOTJA 268 99.2 99.2 (tr|I3SJI8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G20010.1 239 88.4 92.2 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Medicago Medtr3g107707.1 243 89.1 94.6 | GTP-binding nuclear Ran-like protein | HC | chr3:49686750-49683969 | 20130731
Soybean Glyma06g07420.2 244 89.1 94.6  
LJGI gnl|LJGI|TC72255 779 100.0 100.0 homologue to UniRef100_Q6J9G2 Cluster: RAN; n=1; Nicotiana sylvestris|Rep: RAN - Nicotiana sylvestris (Wood tobacco), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1833610.1 length: 129 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMPfam PF00071 Ras 3.6e-20 1-80
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
FPrintScan PR00627 GTPRANTC4 3.8e-36 3-24
39-57
77-99
HMMSmart SM00176 Ran 9.2e-62 1-129
ProfileScan PS51418 RAN 11.775 1-80
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 0.00066 1-83
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-20 1-108
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.7e-21 1-124
HMMPanther PTHR24071 FAMILY 1.3e-96 1-129
Wolf-PSORT
Lj4g3v1833610.1	chlo 4, cyto 4, nucl 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1833610.1